Scientific Publication

Coverage-Based Consensus Calling (CBCC) Of Short Sequence Reads And Comparison Of CBCC Results To Identify SNPs In Chickpea ( Cicer Arietinum ; Fabaceae), A Crop Species Without A Reference Genome 1

author(s) Azam, S - Thakur, V - Ruperao, P - Shah, T - Balaji, J - Amindala, B - Farmer, A D - Studholme, D.J - May, G D - Edwards, D - Jones, J.D.G - Varshney, R K
from International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)
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Azam, S and Thakur, V and Ruperao, P. and Shah, T and Balaji, J and Amindala, B. and Farmer, A D and Studholme, D.J. and May, G D and Edwards, D. and Jones, J.D.G. and Varshney, R K (2012) Coverage-Based Consensus Calling (CBCC) Of Short Sequence Reads And Comparison Of CBCC Results To Identify SNPs In Chickpea ( Cicer Arietinum ; Fabaceae), A Crop Species Without A Reference Genome 1. American Journal of Botany, 99 (2). pp. 186-192. ISSN 1537-2197

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Abstract

The importance of genomics for human health and agricultural applications led to the development of high-throughput sequencing methods that can generate data rapidly at a relatively low cost. Several such technologies, commonly known as next-generation sequencing (NGS), have been developed over the last decade ( Mardis, 2008 ; MacLean et al., 2009 ; Metzker

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